Corneal Dystrophies Made Easy: Layers, Stains and Genes

Corneal Dystrophies Made Easy: Layers, Stains and Genes

Last updated: October 2026

There are more than 20 corneal dystrophies, but you only need to know which layer each starts in and a few "odd ones out". The layer predicts the symptoms, the look at the slit lamp, the stain and the operation.

Four rules

1. The layer decides the symptomEpithelium and Bowman: recurrent erosions and pain, often in childhood. Stroma: slowly falling vision and glare. Endothelium: oedema, worse in the morning.
2. The layer decides the operationSuperficial (epithelium, Bowman, anterior stroma): PTK or superficial keratectomy. Stroma with healthy endothelium: DALK. Endothelium: DMEK or DSAEK.
3. Almost everything is autosomal dominantThe exceptions are macular and gelatinous drop-like (recessive), CHED (recessive) and X-linked endothelial dystrophy. Note: Lisch dystrophy, once called X-linked, is now classed as dominant (IC3D 2024).
4. One gene builds a whole familyTGFBI (5q31) causes Reis–Bücklers, Thiel–Behnke, granular 1 and 2, and lattice 1. The amino acid hotspots R124 and R555 decide which one.
EpitheliumEpithelial basement membrane (map-dot-fingerprint)Meesmann (KRT3, KRT12) · Lisch (MCOLN1)Epithelial recurrent erosion (COL17A1)Bowman layerGelatinous drop-like (TACSTD2, AR): subepithelialReis–Bücklers (TGFBI R124L) · Thiel–Behnke (R555Q)Anterior stromaGranular type 1 (R555W) · Granular type 2 / Avellino (R124H)Lattice type 1 (R124C) and lattice variantsFull-thickness stromaMacular (CHST6, AR)Schnyder (UBIAD1, cholesterol)Congenital stromal (DCN) · Fleck (PIKFYVE)Pre-DescemetPre-Descemet · PPPCD (PRDX3)Descemet + endotheliumFuchs (TCF4 repeat; COL8A2 early-onset)PPCD (OVOL2, ZEB1, GRHL2) · CHED (SLC4A11, AR)
Where each dystrophy starts. Gene names in brackets; AR = autosomal recessive.

The classic stromal trio and their stains

Granular (type 1)Lattice (type 1)Macular
DepositHyalineAmyloidGlycosaminoglycans (keratan sulphate)
StainMasson trichrome (red)Congo red: apple-green birefringence; thioflavin TAlcian blue, colloidal iron
LookDiscrete white crumbs, clear stroma in between, periphery sparedFine branching refractile lines, centralGrey-white hazy spots, cloudy stroma in between, reaching the limbus
ThicknessNormalNormalThin
ErosionsOccasionalFrequentOccasional
InheritanceAD (TGFBI R555W)AD (TGFBI R124C)AR (CHST6)
Vision fallsLate (4th–5th decade)Middle ageEarly (1st–2nd decade)

Memory hook: Marilyn Monroe Always Gets Her Man in L.A. City: Macular – Mucopolysaccharide – Alcian blue; Granular – Hyaline – Masson; Lattice – Amyloid – Congo red.

Memory hook: Macular is the odd one out in everything: recessive, not TGFBI, whole stroma to the limbus, cloudy in between, thin cornea, earliest loss of vision.

TGFBI hotspots at a glance

MutationDystrophyLayerWhat to remember
R124CLattice type 1 (classic)Anterior–mid stromaAmyloid lines; erosions. Over 80 other TGFBI variants give “lattice variants” (IC3D 2024)
R124HGranular type 2 (Avellino)Anterior stromaGranular + lattice features; worsens dramatically after LASIK: screen family history before refractive surgery
R124LReis–BücklersBowmanGeographic opacities; painful erosions from early childhood; recurs early in grafts
R555WGranular type 1Anterior stromaBreadcrumbs with clear spaces
R555QThiel–BehnkeBowmanHoneycomb pattern; curly fibres on electron microscopy

Memory hook: Codon 124 gives lattice (C), Avellino (H) and Reis–Bücklers (L); codon 555 gives the two neat patterns, granular crumbs (W) and the Thiel–Behnke honeycomb (Q).

Epithelial dystrophies

DystrophyKey features
Epithelial basement membrane (EBMD, map-dot-fingerprint, Cogan)Most common; usually degenerative rather than inherited; maps, dots and fingerprint lines; recurrent erosions; irregular astigmatism that spoils keratometry before cataract surgery
MeesmannMyriad tiny intraepithelial cysts in childhood; keratin genes KRT3 and KRT12; usually mild
LischWhorled grey band-shaped epithelium seen best on retroillumination; MCOLN1; now autosomal dominant (IC3D 2024)
Epithelial recurrent erosion (ERED)Erosions from childhood, often improve with age; COL17A1; Franceschetti, Smolandiensis and Helsinglandica are now grouped with it
Gelatinous drop-likeMulberry-like subepithelial amyloid; recessive (TACSTD2); common in Japan; recurs after surgery

Other stromal dystrophies

  • Schnyder: central ring or disc of cholesterol crystals (only in about half), dense arcus, mid-peripheral haze; stains with Oil red O; UBIAD1. Check fasting lipids: many patients have hyperlipidaemia.
  • Congenital stromal: flaky cloudy stroma at birth (DCN, decorin). Fleck: tiny asymptomatic flecks throughout (PIKFYVE).
  • Posterior amorphous, central cloudy of François, pre-Descemet: mostly asymptomatic posterior haze; PPPCD (punctiform and polychromatic pre-Descemet) is linked to PRDX3.

Endothelial dystrophies

DystrophyOnsetKey featuresGene
FuchsUsually after 40; women more oftenCentral guttae → stromal oedema → epithelial bullae; morning blur. Guttae + oedema → DMEK or DSAEKTCF4 CTG repeat expansion (late onset); COL8A2 (early onset)
Posterior polymorphous (PPCD)Childhood, often asymptomaticVesicles, bands and geographic patches at Descemet; endothelium behaves like epithelium; may cause glaucoma and corectopiaOVOL2, ZEB1, GRHL2
Congenital hereditary endothelial (CHED)BirthBilateral ground-glass corneas, very thick, normal IOP and corneal diameter (vs. congenital glaucoma); nystagmus in severe casesSLC4A11, recessive
X-linked endothelialBirth (males)Moon-crater endothelial changes; clouding in malesX-linked
  • Cloudy cornea in a newborn: remember STUMPED: Sclerocornea, Tears in Descemet (birth trauma, congenital glaucoma), Ulcer, Metabolic (mucopolysaccharidoses), Peters anomaly, Endothelial dystrophy (CHED), Dermoid.
  • PPCD vs ICE syndrome: both have epithelial-like endothelium. PPCD is bilateral, inherited and found in the young; ICE is unilateral, sporadic, in middle-aged women.

Treatment by layer

ProblemOptions
Recurrent erosions (EBMD, ERED, Reis–Bücklers, lattice)Lubricants, bandage contact lens, hypertonic saline; debridement with diamond burr polishing, anterior stromal puncture, or PTK
Anterior stromal deposits (granular, Avellino, Reis–Bücklers, Thiel–Behnke)PTK first; DALK if deeper; recurrences can be re-treated with PTK
Deeper stromal disease (lattice, macular, Schnyder)DALK (macular may also affect the endothelium, so PK is sometimes needed)
Endothelial disease (Fuchs, CHED, PPCD)DMEK or DSAEK; Descemet stripping only (DSO) with a ROCK inhibitor for selected Fuchs patients

Where residents slip

  • Mixing up the stains: use the Marilyn Monroe line.
  • Calling macular dystrophy dominant: it is recessive and not a TGFBI disease.
  • Doing LASIK on a patient with faint anterior stromal dots: Avellino dystrophy can explode after LASIK.
  • Confusing CHED with congenital glaucoma: CHED has normal IOP and a normal-sized cornea, with no Haab striae.
  • Forgetting EBMD before cataract surgery: irregular topography gives wrong K readings and toric IOL errors. Treat the surface first.

Test yourself: flip cards

Quick quiz

Related: Cornea hub, Fuchs dystrophy, Genes and eye diseases, Eye embryology made easy.

Key sources

  • Weiss JS, Rapuano CJ, Seitz B, et al. IC3D Classification of Corneal Dystrophies, Edition 3. Cornea. 2024;43(4):466-527
  • Weiss JS, Møller HU, Aldave AJ, et al. IC3D classification of corneal dystrophies, edition 2. Cornea. 2015;34(2):117-159
  • American Academy of Ophthalmology. Basic and Clinical Science Course, Section 8: External Disease and Cornea (current edition)

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Written by Dr. Dhaval Patel, MD (Ophthalmology, AIIMS New Delhi)

Consultant, Cataract & Refractive Surgery — among a small number of AIIMS-trained ophthalmologists practicing in Gujarat. Read full credentials & experience or view his 28 publications on ResearchGate.

📚 Also the author of OKAT Decoded and other high-yield ophthalmology exam-prep books used by residents and PG aspirants.

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